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Sun, Ninghui
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An autotuning protocol to rapidly build autotuners
Liu J., Tan G., Luo Y., Li J., Mo Z., Sun N. ACM Transactions on Parallel Computing 5(2): 1-25, 2018. Type: Article
While autotuning has become a valuable tool for the high-performance computing (HPC) community to achieve “performance portability,” that is, the program runs on the new architecture correctly and with the expected ...
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Mar 7 2019
Accelerating irregular computation in massive short reads mapping on FPGA co-processor
Tan G., Zhang C., Tang W., Zhang P., Sun N. IEEE Transactions on Parallel and Distributed Systems 27(5): 1253-1264, 2016. Type: Article
Next-generation sequencing (NGS) is a big data problem. On the one hand, it is embarrassingly parallel; on the other hand, the memory accesses are irregular (noncontiguous). This is a unique application category where throwing extra co...
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Oct 4 2016
High-performance computing in China: research and applications
Sun N., Kahaner D., Chen D. International Journal of High Performance Computing Applications 24(4): 363-409, 2010. Type: Article
Chinese high-performance computing (HPC) efforts used to be elusive and somewhat suspect to outsiders, except for the recent rise of Chinese supercomputers to the head of the TOP500 list of the most powerful systems (http://www.top500....
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Jun 22 2012
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